rs50099061 SNP Detail

Summary

• ID
  rs50099061
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:9115302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTCCTTTGGA GTCCCTGACT TCCCAATATG CAGAAGCACA
  GGTGGGTCCT CTCATGGCTG AGAGACCAAC AAGAGAGGGA AAGGGGCTCG AATCCCCAGT
  K
  AGCAGAGGTC CACAGCTCCA CTCTTACAAG TTCTACCACC TTCCAGTAGT GCCACCGGCT
  GAGGGACAGG CTCCAGTGAC CCTTTCCAGG TTCCAGCATC T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145985360	ENSMUSSNP4013482	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50099061					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:9115302 () rs orientation: forward

Symbol	Name	Function Class
Gm54233	predicted gene, 54233	within coordinates
Rr588667	regulatory region 588667	553 bp proximal
Rr588668	regulatory region 588668	1799 bp proximal