rs50094728 SNP Detail

Summary

• ID
  rs50094728
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:88725418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCTGTTCGG TGTTAGAACC ATTCTCTCTC CTGTCATGGG
  CTTCTGGTTA GCTTCTTGTA ACCTGGGAAC TCCTTAATCT CAGACTTTGC CCGGTCTCAG
  K
  TTTTCTGTTT GTTTGTTTGT GTGTGTGTGT GTTTTTTGAA AATCTCCCTT GGAAGGAAGT
  TACTCCAGAG GTTGATGAAC CTCTTTGCTT GATCTTTGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146940313	ENSMUSSNP2157849	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50094728					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88725418 () rs orientation: forward

Symbol	Name	Function Class
Gm13288	predicted gene 13288	mRNA-UTR
Rr595116	regulatory region 595116	1640 bp distal
Rr595117	regulatory region 595117	1677 bp distal
Rr595118	regulatory region 595118	1164 bp distal
Rr595119	regulatory region 595119	1018 bp distal
Rr595120	regulatory region 595120	676 bp distal