rs50091913 SNP Detail

Summary

• ID
  rs50091913
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102277070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGCCTGCA AAATTCCACA
  GCTCATCGCT CCCCGAAACT AACGGGCCAT GTGAAAAACA GAACTACAGT CTCCCCGTAA
  GGAAGAGGGA GGTACCTATG CTAACTCTAC CACAGAGGAC ATCTTCAAAA ATAGATGCCC
  TAGTGTGGCG ACCATGTTGT CTAGGTATCT CTTGCCAGAC TCATTCACTC CTCTCCAGCC
  Y
  GTAGAAAGTG TTCTTATAAC CACAATGAAA AGGCTGGATC ATGGGAGGAT TCAAAGCGTC
  TGGGGATTTG ACTCAGCTGA GGAATGATAC TCCACTTTAA TAAATCCCCG TTGTGGTTGC
  TGAGTGCCAG GTACTCTTCT GAGAAGCTCG TCAATATTTA CTCATTGAGT TCACACTGTC
  AGCCTCTGGG TTTCAGAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147112233	ENSMUSSNP5252902	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss320437723	CHEV_2_102286882	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50091913					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102277070 () rs orientation: forward

Symbol	Name	Function Class
Rr561693	regulatory region 561693	1099 bp proximal