rs50065321 SNP Detail

Summary

• ID
  rs50065321
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr16:4528905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAAGCCCA GACACCTAAA
  CCCCACCTCT CTCTTCTTCG CAGCTATTGG CTGCTGGCAT CTTTATTTAC CAGTCAGAAT
  TAACTGAAGG CAGGTTCCCA GAAGCTCCTT GCAGACTCCA AATCTTGGAG GCCAGCACTT
  AGCGCTAGAA TACAAGTAGT GTTAGGCCTA CCTACTACAG TTAGTCTTCC GTCAACAATT
  Y
  AGAGTGAATG CACAGGTGGC CTCAGTGCCT GTGGTCCTGC CTGCCTGGGG GTATTCAGGG
  GTGTCAAACA CTCAGGGGTG TTGCCTCCCA GTGCATGCAC AATGCTCAGG GTTGAGAGTC
  GAGTAAGTAC TTCATGACTT TAAACACACC AAGTAAGCCT GCGCCTCCTA TTCCAGTTTT
  GTTGGTTTTG TTTGTGTGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63636275	NES17047419	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50065321					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63636275	NES17047419	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:4528905 () rs orientation: forward

Symbol	Name	Function Class
Nmral1	NmrA-like family domain containing 1	mRNA-UTR