rs50056625 SNP Detail

Summary

• ID
  rs50056625
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94447431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTAATAGG GATCCGATGC
  CCTCTTCTGG TGTGCCTGAA GACAGCAATA GTGTACTGAC AGACATGAAA TAAATAAATA
  AATAAATCTT AAAAAAAAAA AAAAAAAGAA CTGAATGTAC CGTGTTGCTA GAAACTTGAT
  CTTAAGTAGT TGTCCTACAA AGCTGCAGTT ATGAGTCCTG AAGTAAATTT TACATAGCAA
  S
  GGTCTCCTAA GTGAGGGTTT CTGTCATGTA ATACAAAAAA TTCCTGAATC ATGTCCAGCT
  GCTGAGCATC CATAATTCTA GTAGGTTTAT GTGTGGTTCT AAGACATCAA GAGAGACAAT
  AATATTTATG AAAGACAGCA AGCATACAAA TTAGTAAATG CTGAGATCTG TATCTGAAAG
  GAGACTCAGT TCCTAGGGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147049686	ENSMUSSNP42248	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50056625					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94447431 () rs orientation: forward

Symbol	Name	Function Class
Rr595335	regulatory region 595335	1908 bp distal
Rr595336	regulatory region 595336	641 bp distal
Rr595337	regulatory region 595337	276 bp proximal