rs50045823 SNP Detail

Summary

• ID
  rs50045823
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135003242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTTTCT AGTCCTTGGA
  CATCGCAAGC ACACCGCTGC CTCAGGGCCT TTGCGCGTGC TCTCATCTCC CACTGAACCC
  TCTGTCTCCC AGAATTCCCA CTCACTCACG TCCTTCAGAT CTTTGCTCAA GATAGTAACT
  CCTTAGACAT TCATTGGCTA TCACCTATGC AAGCTGGGTA CTGCCAGCAC TCCTCCTCCA
  R
  CCTCTGCTTC CTTCTCTGTG AGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTCTGTTCC TTGTATATAG TCCAAAGTGG CTTTAACCTG ACACAGCCTA TAATCATCAC
  AGCCTATAAT CATCTGAGAA TACAGTCTCA ACTCAATCGC CCAGGTCAGA TCATCCTCCA
  TGTCTATGCC TTGTCTATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147543427	ENSMUSSNP1407528	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50045823					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135003242 () rs orientation: forward

Symbol	Name	Function Class
Rr601982	regulatory region 601982	519 bp distal
Rr601983	regulatory region 601983	883 bp proximal