rs50030027 SNP Detail

Summary

• ID
  rs50030027
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121652534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTGTAAGT TGTGGAGGAA CAGCAGGCAG CTGCTCTACG
  CCCTCCTGGG CCTCTATAAT ATCGGAACCC TCCCTCTGAC AGAGTTCCTG GTTGCAGATG
  W
  TTCCCCAAGC CTCTTTCCTG TCTTCTTCAC TCTGCTTCTG TGTTTTCTAT CTTTCAGCTC
  GCCCCTAGAG CTCTTCCCAT TCAGAATTAG ACTCAGTGC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135730593	ENSMUSSNP3998341	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss320906446	CHEV_3_121561803	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50030027					SNP	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121652534 () rs orientation: forward

Symbol	Name	Function Class
Rr584185	regulatory region 584185	335 bp proximal