rs50026974 SNP Detail

Summary

• ID
  rs50026974
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148685966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCAGGGTA TCTTAACTCT
  AGGCTATAAT TTCTATTTGT TGACACAATG AAGTAGTTTT GTATCGTATC CATCTTTTTG
  TAAACATACA CAGCCTATCA GTCTCCAGTG TGCCTTGTGT CGATTCACAG GAAGCCTTCA
  GCAAGCACCT GGCAACGAAT GGCTGGAACA TGGGACCAGA ATCCAGCACT ACCAAAGGAT
  R
  GTCCCAACAG CCACAAGAAA ACTGAGGACT TTAGGAACGA AAACAACTTT AAGGATCGAA
  AAATGAGGAG GGCAAGGAAG AAGCTGGGGA TGGGACAATA GGGAGAGCCT TGCTTAGTAG
  CAACTAGAAG GCTCAATTCC TAGCACTGAG GGAAGGGGGG CGGAAATTAG TGGAGAAAAG
  GATGTGTAAG AAAAGTAATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321017016	CHEV_3_148643294	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs50026974					SNP	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss136065925	ENSMUSSNP4635563	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148685966 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587237	regulatory region 587237	1411 bp distal
Rr587238	regulatory region 587238	1641 bp distal
Rr587239	regulatory region 587239	1508 bp proximal