rs50018364 SNP Detail

Summary

• ID
  rs50018364
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17943463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAAACAA ACGAATAAAC
  AACTGAGAGA GGAAAGGATG TAAATAGAGT CACAAAAGCA CTAGCCCCAA ACAGAGTGTG
  CGCACATGCC AAACAGACAC AGGGAAGTCA GGTTTTCAAG GTGGGTTTAA GCTCCATTGA
  AACACACATC TGTGCCTCAG TAGGTTGTTA TAGCTTTGTG GACAAGAAGC CACAGACCAG
  S
  AGTCTGTCCC AGAACCTGGC TGCTTACACC CTTGTTGCCG TCTCAAACAC TTCATCCAAG
  AGTACCTTTT AAGCTTTCTC ATGTTTGCAT TTCTGACACT TTAATCTGAG CATTCTTTGA
  GTATTTTACT GATCTGAACC AAAATGATGA TTTGTCCTCA CCACCTCTCA GAGCTTTGTG
  CATGATTCAA ACCTAGCAGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133025451	ENSMUSSNP4622016	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50018364					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17943463 () rs orientation: forward

Symbol	Name	Function Class
Rr626887	regulatory region 626887	334 bp proximal
St7	suppression of tumorigenicity 7	441 bp downstream