rs50006414 SNP Detail

Summary

• ID
  rs50006414
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17674823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGAGGGAA GGAAGAAATG
  ATGGAATCAT TTTATAATCT CAAAAGTAAA ATCAATTAAA AAACAAACGA TTTTACCGGA
  GAAAGAGGCT ACAAGAGTGT GGTCAGAGGC TAACTTGCTG CAGTCTATTC TCTCCTTCCA
  CCATGTGGGT TTGGGGGATT GAACTCGGGT ACCAAACTCC TTTCCCCACA GAGTCATCTG
  G
  CAGGCCAGGC TGAACATCTC TAATTACACA CACTGTTTGT CGTGGTTTGA AAGAGGATTA
  CCCCCATAAC ACTGCGTGTC TGAGTGCTCG GTCTGGCGTT AGTGGAACTG TTTGGGAAGA
  ATTAGATGTG GCTTTGTTGG AAGAGGTGTA ACACTGGAGG TAGACTTTGA GGTCTCAAAA
  GCCCATACTA GGCCCAGTCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133020155	ENSMUSSNP4998539	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs50006414					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17674823 () rs orientation: forward

Symbol	Name	Function Class
Rr399579	regulatory region 399579	624 bp upstream
Rr626829	regulatory region 626829	467 bp proximal
Rr626830	regulatory region 626830	750 bp proximal