rs49993482 SNP Detail

Summary

• ID
  rs49993482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8241517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGAGTCCA TTCCCAGTAT
  GTGAAACTTT GAGATTTCTA ATATCCTTTT GAGTGTATAT GCTAGACTTT GAATATTTTA
  TTTCCTGCAG AGACATTTGA ACAGAGTGAA AATGAACTCG CATAGAACAA AATTGCCAAG
  CATATGTGAC GGAACTGTAG GGAAGAGGCG CACACTTTAA TCTGCAAGGA TGCTTAAAAT
  Y
  GCTCCATGTT GGTTACGCAT GAGGCCTGAC AGCTGACATT TCTCATTTCG GCCTGTCTGC
  ACCAGATCAC ATTCATCTCT GGAATAGATG GTTAATGACA TGCCTCTCAT TCCCACTCCT
  TTTGGACGGA ATAGTGGAGG CTTTGGTTGA TTTAGTCATC AGCACCCTTA CTGAAATGTG
  GTCCCCAGAG CCAAGGCCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132964772	ENSMUSSNP4228127	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49993482					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8241517 () rs orientation: forward

Symbol	Name	Function Class
Rr626362	regulatory region 626362	521 bp distal