rs49972984 SNP Detail

Summary

• ID
  rs49972984
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42851571 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAACTCAC ACAGGGTAGG
  CAATTGCTCA ATTACTAGGC TACCTCCCTG GTCCTTTTTG GAGTCACTTC ATGTCTCTGA
  GTCTGTTTTT CTTTCTGTGG TAGAAGAGAT CTGGTTCACA CGCTTCATCC TGTGTCTGAG
  GCAGAGGACA GGAGTCTTGC AAGCCTGGTC TTGCTCCTAC TCCCGCCCCC TACCCACCCC
  T
  ACCCCCAACC CCAAGCTGGA CCATCTTTAC CTGTTTTCTT TGGAGGTTCA GTTGCCAAGG
  CTGTTGAAAT AAACACATGC CAGACAGATT AACAGGAGGA AAGACATCCA AATACACTGT
  CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAGAAACC CTATGGCTCT
  CATCTTAAGG GAATAAAAGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147085410	ENSMUSSNP7189937	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs49972984					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42851571 () rs orientation: forward

Symbol	Name	Function Class
Gm5079	predicted gene 5079	185 bp downstream