rs49961214 SNP Detail

Summary

• ID
  rs49961214
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132685674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGGCTAGGCC ATTTGGAGCC CAGAGGCTCG TGAGTGGGTT
  CCAGGCACTA AGTACTTAGC TTTTCACACT GCTGAACTTT GTCTTGGTTC TTCCCTCTTG
  G
  ATTAAGTATT TTACCTATTT AGGTTTGGTA GGAGCCCACA GTTAATTCGG AACTTGTGAA
  GAGACTCTAG AGTTTCAGAA TGACTGGGCG TTTTTAGAGA G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135915778	ENSMUSSNP6189817	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49961214					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132685674 () rs orientation: forward

Symbol	Name	Function Class
Gstcd	glutathione S-transferase, C-terminal domain containing	1839 bp downstream
Rr585492	regulatory region 585492	335 bp proximal