rs49938111 SNP Detail

Summary

• ID
  rs49938111
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114440889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATGGGAGTA GTGGATGGGT GGAGGAGCAA CCTTATAGAG
  GCAGGGTAAT CAGGGATGGA ATAGGGTGTT TCCAAATAAA GATCTGGAAA GAGGAAAACA
  T
  TTGAAATATA AATAAAGAAA ATATCCAATG AACAAAAGAA AAGTAGGTAC TGAGAATGCA
  CAATTTTCCT AATCATGTTC ATGTAGAGGA ATTTTGAGA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138784382	ENSMUSSNP5839513	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49938111					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114440889 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1738 bp downstream