rs49928073 SNP Detail

Summary

• ID
  rs49928073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141170419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTC TCATTGAATT TTAGATTTAG
  R
  GATTGAGGAC ACAAGAGATC CATCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147737096	ENSMUSSNP1507244	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49928073					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141170419 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15230	CpG island 15230	1373 bp proximal
Gm42337	predicted gene, 42337	878 bp downstream
Rr603767	regulatory region 603767	1880 bp distal
Rr603768	regulatory region 603768	1088 bp proximal
Rr603769	regulatory region 603769	1557 bp proximal
Rr603770	regulatory region 603770	1997 bp proximal
Tssr40079	transcription start site region 40079	1549 bp upstream
Zbtb17	zinc finger and BTB domain containing 17	1565 bp upstream