TTCCC ACATTCTGAT ACTGTCTAGT R AGTACATCTC TGCGAGTTGA CGTGA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
DBA/2J |
FVB/NJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss61089563 | NES16605959 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | A | G | A | A | G | |||
ss136009105 | ENSMUSSNP6954822 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||||||||||||
ss320997329 | CHEV_3_141644501 | CHEVERUD | SCREENING_POP | f | SNP | A | G | ||||||||||||
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
DBA/2J |
FVB/NJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs49927831 | SNP | G | G | G | G | G | G | G | A | A | G | A | A | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss61089563 | NES16605959 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr3:141687298 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bmpr1b | bone morphogenetic protein receptor, type 1B | Intron | ||||||
Rr586376 | regulatory region 586376 | 152 bp proximal | ||||||
Rr586377 | regulatory region 586377 | 584 bp proximal | ||||||
Rr586378 | regulatory region 586378 | 717 bp proximal | ||||||
Tssr35923 | transcription start site region 35923 | 669 bp downstream | ||||||
Tssr35924 | transcription start site region 35924 | 687 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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