rs49924858 SNP Detail

Summary

• ID
  rs49924858
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151477710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGTGCCAG CTGTGAGCCA
  GCAGCAGACC CTTACTAGAT GCTGAATCTG TCATCTCCAT ATGTGAGTAG TGTACCCCAC
  TCCACTGATT AACTGATGTG GCACGAAGCA TTTCCAGGGA GAATACTTAG TGGACACCTA
  TAAACCAACA TATAGAAAAG ATAGTCCTTC CTAGCTGACA GGTGAGCATA TGCAAATGAA
  C
  TCAACTCCAT TAATTGCCAA GAAAATGAAA ACTAAGCCCA CAATGAGGTA CCACTACACA
  ATACAAGTGA CTCAAATGGC AAGGGCCTGA AATCTGACTT CTTCCTTACC CAGCTGTATC
  CTCTTATTCT TCCTGTATTA TCATTCCACT TAGGACTTTA AGCGCCACAC TTAATAACGG
  TATTTTTCCA TCCCTAGCTT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136098021	ENSMUSSNP1789678	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321026843	CHEV_3_151435037	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49924858					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151477710 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1014 bp distal
Rr587416	regulatory region 587416	687 bp distal
Rr587417	regulatory region 587417	756 bp distal