rs49922370 SNP Detail

Summary

• ID
  rs49922370
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57880658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATTTGCAG AGAGGGGAGG
  GTCATAAGCA GACAGCACAC ATCTTTTAAG GAGGCACAGT GAGACAGGAG GGTCTGCACC
  AAAGATACCC ACATGTTCTC CCAAAACGAA TTATTTCCTA CTAAATAAAA TTGCTCAAAT
  TGCTCTCTTG GTTCAAGTGA ATGTCTTGCA GAAGTCAGCC AGGAAGTAGG CTGGGTGGTT
  M
  ACATTGAGGC TTGTCTCTCT GCCAGCATCT CTAAACTGAG CCCAACTCTA TTCAATGCCA
  GTTGTATGTC CAGCATCTCA TAGCTGAAGA AGCCACAATA AGAGTTGTTC TAGTGTGTCT
  TCTGCTTCTG AACAAGCTTC ACTCCAATGT AACCGTGGCT ATTCAAAATC AGGAATAAGA
  TGCTCTGTTC AGATGAATTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135205287	ENSMUSSNP2703204	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49922370					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57880658 () rs orientation: forward

Symbol	Name	Function Class
Gm32753	predicted gene, 32753	within coordinates
Rr577179	regulatory region 577179	254 bp distal