rs49921537 SNP Detail

Summary

• ID
  rs49921537
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54505816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTATGGAG TCTACACCAT
  GTATCTATTG ATGAGTGGCT GATTGCCACG CTACTTGGCA ACTTCAAACA AGTAGCCTTG
  CTTCATCTCT GTCCTTTGGG TGTAAGGGCT ATGGGTACAG CTGCGGTTCA CTGTATTACA
  GTTCCTCACA AGATCACTCT CAAGGCTGGC TGATCTTGCC AGCTGAGGCT GCAACCGCTT
  C
  AGGGATACAC TAGAGGAATA GCTAGTTCCA AAGGCAATCC CTGGATACTG TCAATCCTTG
  GAAGATCCTG CTGGGAGAGG CAACAGCTCC TGGCCTCACA TGACTACAGC TGGCTCTGCC
  AGGCATAATG GGAGAGAACA GAGGATGCCC TGGGCACAAA GAGGCTTCAG CAACCACAAT
  AGCTTTGTCA CGCTATATTT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135184584	ENSMUSSNP4710562	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs49921537					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54505816 () rs orientation: forward

Symbol	Name	Function Class
Gm40050	predicted gene, 40050	within coordinates
Rr576818	regulatory region 576818	251 bp distal