CAGGA GCAACAGCTA GTATGTATGA Y CCTTCCAGAC AGAGCAATCA ACTGT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
MSM/Ms |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss148043540 | ENSMUSSNP7013517 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | C | T | ||
ss321427318 | CHEV_4_149309381 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
MSM/Ms |
SM/J |
||||
rs49916158 | SNP | T | T | C | T | T | C |
Location: Chr4:150019729 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr377412 | regulatory region 377412 | 1108 bp upstream | ||||||
Rr605111 | regulatory region 605111 | 1082 bp distal | ||||||
Rr605112 | regulatory region 605112 | 1593 bp proximal | ||||||
Spsb1 | splA/ryanodine receptor domain and SOCS box containing 1 | Intron | ||||||
Noncoding-Transcript-Variant |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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