rs49913192 SNP Detail

Summary

• ID
  rs49913192
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72858477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGAGGAAA ACCTTCAGCA
  TAAGCAAGAA AGCTCTACCC ACTGTGGCAG CCTGACCTCA GTGTATCTAT GAACTGGTAA
  ATTATCTTCT ACTCTCTCCT GCCAGAGCAT GGTAGTTGAG TCGTAAGATC TGAACTGTAG
  GCCTTCTTCG GTCACCACTG TGTGGTGACT CAGCTCTTCC GGACCACAGC GGGAAGGAGG
  R
  GTGGCAAACA GGAAACACAT GGAGGCTGCA GCGCTTGTTT TCCTTCAGAA CCGAAACGTC
  CATTACTATC TTTCTTTTGA TTTTATTAGA GAAAAGGATT AGAATAAACT AATTCCCATA
  GCTAGATCTC CAAGCAGGGC CTGTACAGTT CTGCATAGCC TTCTGTAGAG TCCCCTTGCC
  AATGAACCAA AGAAGGGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133287823	ENSMUSSNP3380769	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49913192					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72858477 () rs orientation: forward

Symbol	Name	Function Class
Kcmf1	potassium channel modulatory factor 1	Intron
Rr632324	regulatory region 632324	within coordinates
Rr632325	regulatory region 632325	1246 bp proximal