rs49903498 SNP Detail

Summary

• ID
  rs49903498
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102297774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAACCTAT AGCTGTTAAC
  TCTATCATTT CAACCACCAT GTGTTCCTGT TGATAGAGGG AATAAAAAAA AATCGACCAG
  CGTCTCACAC CATATTCATG CTTACTTATA ACAAAACACC TAAGAATGAT GTCTTTCACA
  ATTAAAACTG AGTCAAAATT CTACAGGAAT TCCCCTAAGC TGTAGAATCG CCTCACCTGC
  M
  GATGGGGAGA AGCTCAAAGA GGCCCTAGCC TGAATCTTAA TTTCTCTACA TGTATATTCA
  TTTTGCCTTT AAAAAGAGCA TTTTAAAAAC AAACAAACAA AAAACTTCAG TATATTGGAA
  AAAAAACCAC AAGAATATAT GAAAGGAACT CAATATTTCC AGTAACCTGG GATTTCTCCT
  GAGATTCACA AATTTAATTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147131238	ENSMUSSNP4440613	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49903498					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102297774 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde4b	phosphodiesterase 4B, cAMP specific			Intron
				Noncoding-Transcript-Variant
Rr596244	regulatory region 596244			694 bp distal
Rr596245	regulatory region 596245			142 bp distal