rs49873647 SNP Detail

Summary

• ID
  rs49873647
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126067809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTATTTCC AGGCTTCAGA ACTAAGTTGA CTCCCTCTGC
  TAGGGAATCC TACTGAACTG AAGGAGGCTA GACCTCATTT GTATGAAAGT GGGGGGGGGG
  G
  GCTTTGCACA GCCTTAGGAG AATCTTGCTA TTTCTATGCC ACTAATCAGT GGTAATTGGG
  GAAACCTCCT ATGGTCAGAG ACCCCCCCTC CAAAAAAGG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135827527	ENSMUSSNP7127522	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49873647					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126067809 () rs orientation: forward

Symbol	Name	Function Class
Rr375705	regulatory region 375705	1109 bp downstream
Rr584627	regulatory region 584627	1936 bp distal
Rr584628	regulatory region 584628	1965 bp proximal