rs49865295 SNP Detail

Summary

• ID
  rs49865295
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135667433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGCCTTG GGGTGTCAGG
  CCGGGCTCAG GCGTAACTCA TGTCCTTGGA TGGCTTGGGA GTCAGGAAGA GACAGGGAAG
  AGGGGACTAT AATTTAGCTT TTACAGCCTC AGGTGCCAGG AAGGGAATAG GGAGGAGGGA
  GTGATAACCA GCTCCTAGCA TGAGGCCATT TGGCCTGTCA GGGAGATTGT GAAGGGCTCG
  A
  TTTCTCACGG GATGGTCTCT GACACAGAGA TACCAATGAA AGAAGGCGAT GCTGCCTTGC
  CTTAAAAAAA AAAAAAAAAA AAAAAAAAAA AGATGGAAGT AAATTTGTAT GCCAAATTAT
  TTCTACCACA AGCATGTGAT AGGTTTCTTT CCCTAACTTA GGTTACAGCT TTATACTCAT
  TTTCTGGTTT CCTTGTTTGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147554446	ENSMUSSNP2655496	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs49865295					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135667433 () rs orientation: forward

Symbol	Name	Function Class
Fuca1	fucosidase, alpha-L- 1, tissue	mRNA-UTR
Rr602205	regulatory region 602205	986 bp distal
Rr602206	regulatory region 602206	952 bp distal
Rr602207	regulatory region 602207	1101 bp proximal
Rr602208	regulatory region 602208	1850 bp proximal