rs49845819 SNP Detail

Summary

• ID
  rs49845819
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94263242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCA TTAGGGATGG TTGTGAGCCA
  T
  CATGTGGTTG CTGGGATTTG AACTT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133399288	ENSMUSSNP7237355	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs49845819					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94263242 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17759	CpG island 17759	1436 bp distal
Gm31661	predicted gene, 31661	within coordinates
Rr634858	regulatory region 634858	1684 bp distal
Rr634859	regulatory region 634859	1219 bp distal
Rr634860	regulatory region 634860	393 bp proximal
Rr634861	regulatory region 634861	1317 bp proximal