rs49832754 SNP Detail

Summary

• ID
  rs49832754
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108482452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C GTCTGTAACT CCAGTTCCAG GGGATCTGGT GCCCTCATAC
  AGACATACAT GTAGGCAAAA CATGAGTGGA CATCAAAATA AATCTTAAAA AAAGAAGGAA
  K
  GGAGGAAAGA AAGAAAATAG TAGTATTTGA GCCAAGAGTG TAGTTCTGTG GGTAGAGCAC
  TTCCCTAGCA TACCGGGCCC TATAGGAATA ACCAGGAAGT A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133503741	ENSMUSSNP2183103	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49832754					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108482452 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636122	regulatory region 636122	1444 bp distal
Rr636123	regulatory region 636123	1864 bp proximal