rs49826894 SNP Detail

Summary

• ID
  rs49826894
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18906985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTAACTG ACAGAACACA
  AATGTAACTA AAACCTATAA CACTTTATTT GCTTGTGTGT GGATGAGTGT GTATGCGTTA
  TTTATATGTA TGTGTGTATG TGAGTGAGGG TGTATTTGTC TCACTGGGTG CTTGTGGAAG
  TTGGAGAATA ACACTGAATA TTGGTCTGAG CCTTTTATCA TAAGACAGGG TGGTACGTGA
  K
  CTTCGGGAAT CTCCTGCCTG TCTCTTACGA CCCCACAGAT GTACTGGGGT TAACAGGCGT
  GGAACGTGGA CTACTACGCT GGGCTTTCTG TAGGATCTTC AGATTTGGCC TCCATCCTTC
  ACACTTGTGC AGCAAGTGCT TGATCCTCTT AGACATCTCC CCAGCCCCAC ACTTACAAAA
  ACTACTAGAG CGGGTGTGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133043280	ENSMUSSNP2031470	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49826894					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18906985 () rs orientation: forward

Symbol	Name	Function Class
Rr626961	regulatory region 626961	396 bp proximal