rs49819583 SNP Detail

Summary

• ID
  rs49819583
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:81209769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATATATATAT ATATATATAT AAATAATAAT TAAAAAAAAG
  ACGAGGAAGG AGAAGAGTCC TGGAAGAGAG GATAAACTCT GGGCCCCAGC AACGTTAAGG
  R
  ATTAGCTAAG ACTTCATGCT GTCCACCCTC TCTGCTCCTA ATTACCATGG GTAATTGTGA
  GATTCTGAGA CTTGAGCCAG TCTTAGCAGA CTGTGACGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324111381	CHEV_12_82263982	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs49819583					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:81209769 () rs orientation: forward

Symbol	Name	Function Class
Rr469101	regulatory region 469101	1927 bp distal
Smoc1	SPARC related modular calcium binding 1	Intron