rs49761232 SNP Detail

Summary

• ID
  rs49761232
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151475201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCTGACT GGGCCCGGTC
  TGTGGCAGTA GAGCACTTTG AATGTTATAA AAATCATAAA TGTACTTATT TTATCAATAC
  ATGAACCCAT AGATGAGTTC TTTACTGAAC ATGCTGTTAG AAAGTAGTAT GTAGATGGCG
  GAAGCAGGCC ACTGGTAATG GACCTTGGAA GACTTTATCT TGTCCCCAGC TCTCCTCAGG
  A
  ACCATGATAC AAGCAGTTCT GTTCCACAAT GCTCTCCTTG GCATGAGTTC AGCTGCCCCA
  CAAGCTCACA GATTATTATG GACCATGATC CAAAGTAAAT CTTTCTTCAA GTTCCTTTCC
  TAACCCATTT TGTCACAGTA TAGGGAATCT TACTATTGCA GTACATAATG ACACATAAAG
  GTCATTGCTG AGGTAGAATT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136097996	ENSMUSSNP5369612	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321026834	CHEV_3_151432528	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49761232					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151475201 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1474 bp proximal
Rr587416	regulatory region 587416	1621 bp proximal
Rr587417	regulatory region 587417	1732 bp proximal