rs49744320 SNP Detail

Summary

• ID
  rs49744320
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114441318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACATAACA CATTCTCACA
  TGTGTAAGCT AGGATCTGAA TCTGTTTCAA CTATACAGAC TTTAATTTTA TACATTTCTA
  GAGGCACATC CTGAATCTAG CCCAGTAATC TAAGTTCATT CCTACATATA CCCTTGATTT
  CAATCTCCAA GTTAAAGCAA GCAATTTTGA AAGCCTTGGG CTTATTCTAC ATCCTAATGT
  C
  AATCAATCTG CCAGTGCACC TAAGGCTCCC AAACAACTGT TTACTGTTCA GTACATTTTA
  TTCAATAATA GTAGCAGAAG TGATCTGCAT TTTTATTTTA TGAAATATGA TAATTCTAGG
  AATTATTTAA AGATTTTGGT TTTTAGTCTT TCTTATATTA CATCTAGACC ACAGCTGCCA
  GAGCATCCTC TCTTCCAAGT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss138784436	ENSMUSSNP170981	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49744320					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114441318 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1309 bp downstream
Tssr3975	transcription start site region 3975	1793 bp downstream
Tssr118082	transcription start site region 118082	1808 bp downstream