rs49727240 SNP Detail

Summary

• ID
  rs49727240
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:87183001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ACACACATGC TAGAGTTTAA AGGGGTGAAA AATGTGATAT
  CAATAAAAAT TAAAGAAATC TCAAACACTG TATTTATAAA TCATGAAAAG TTCTAAAACT
  M
  TTAAAGTGAA ATTTACATTT TACAGTTGAA AATAATTACC ATGATTTATC ATTAATATTT
  ATAATATTTA ATTAAGTGCT TCTTACCCTA AAGAGAAAAT A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146877379	ENSMUSSNP4678347	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49727240					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:87183001 () rs orientation: forward

Symbol	Name	Function Class
Or12a1-ps1	olfactory receptor family 12 subfamily A member 1, pseudogene 1	182 bp upstream