rs49712927 SNP Detail

Summary

• ID
  rs49712927
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:91037506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTTAAGAT TCAGGTGCCT GCATATAGAG TCCCAGCTCT
  CAGAACAGTC AAGACCATGC ATGGGTGCAG GGAGCTAAGG TTCTCTTGTC GATCCACCAG
  R
  CAATGTCTCC TCCCTCCCCA AGAGTGGCCA TACTCACCAC CTGCTTATTC TGCTGCAGCA
  ATGGGCAGGA TAGGTCCAGC TGCGGGAGGG CATAGACAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133380939	ENSMUSSNP3624213	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49712927					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91037506 () rs orientation: forward

Symbol	Name	Function Class
Nup210	nucleoporin 210	Intron
Rr634373	regulatory region 634373	416 bp distal
Rr634374	regulatory region 634374	642 bp distal
Rr634375	regulatory region 634375	545 bp distal