rs49688713 SNP Detail

Summary

• ID
  rs49688713
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:32241672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGT CAAAAGCCAT CTGTTTTTTT
  Y
  CAAAAGATAT TTGGAAATTG AGAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss60382934	NES15880800	PERLEGEN	MM_PANEL2	f	SNP		C	T	C		C	C
ss134746297	ENSMUSSNP4672829	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs49688713					SNP	T	C	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60382934	NES15880800	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32241672 () rs orientation: forward

Symbol	Name	Function Class
Kcnmb2	potassium large conductance calcium-activated channel, subfamily M, beta member 2	Intron
Rr574931	regulatory region 574931	1084 bp proximal
Rr574932	regulatory region 574932	1198 bp proximal
Rr574933	regulatory region 574933	1634 bp proximal