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rs49672752 SNP Detail
Summary
  • ID
    rs49672752
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr4:148656323 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AAATACAGAC ACAGGTCTTT
    GTGGGAATGG CTGTGCTCGA TGTAATAAAA CTTGTCAAGA TTCAGCTTAA GTGGTTTCTT
    TTAGGGGTCT TGCTTTAATT CTTTCCTTTT TTTTAAGATT TATTTATTTA TTATATATAA
    GTACACTGTA GCTGTCTTCA GACACACCAG AAGAGGTTGT GAGCCACCAT GTGGTTGCTG
    R
    GATTTGAACT CAGGACTTCT GGAAGAGCAG TCAGTGCTCT TAACCACTGA GCCATCTCTC
    CAGCCCCTCC CCCCCCCCCC TTTTCCTTCT TTTTGAGATA GGGTTTTACC ATACAGGGTT
    TCCCTAGGCT AGCCTTGAGT TCAGCTGTGT AATAACCCTG TAGCCCAGGC AGGCCCTGAA
    CTTTCAGTCC AGTCCCACCT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
LG/J
SM/J
ss148011759 ENSMUSSNP1299165 ENSEMBL ENSEMBL_Sanger f SNP A
ss321421259 CHEV_4_147945975 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
A/J
LG/J
SM/J
rs49672752 SNP A G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:148656323 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Exosc10 exosome component 10 Intron
Noncoding-Transcript-Variant
Gm13204 predicted gene 13204 1990 bp upstream
Rr604704 regulatory region 604704 673 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory