rs49666873 SNP Detail

Summary

• ID
  rs49666873
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148640549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC AAATCTGATT TCGGAACAGC
  C
  CTATTAGGCA CATCTTAGAA CTGGG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148011282	ENSMUSSNP334104	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321421158	CHEV_4_147930201	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49666873					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148640549 () rs orientation: forward

Symbol	Name	Function Class
Gm23318	predicted gene, 23318	288 bp downstream
Mtor	mechanistic target of rapamycin kinase	Intron
Rr604703	regulatory region 604703	1847 bp proximal