rs49640047 SNP Detail

Summary

• ID
  rs49640047
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136008111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGTGGCCC TGGTGGGCTT
  CTAACTCACT AGAAAGTGAC CTTGAGCTGC GGAATCTCCC ACCTCAGTTT ATGTGATCTG
  AGGATCAGCC AGGGCCTTGT GCGTCCTAGG GAAGCACTCT GTCAACTGAG TGGCATCCTA
  GCCCTGGAAG TTTTACCATG TATTCTTATT TTCTTGTTTT CTGTATATAT GAGCGTTTGC
  M
  TGCATGCATG GCAGTGCACC AGGTACATAC CTGGTACCCA AGGAACCTGG AGAGGATGTG
  GGATCCCCTT GAACCAGTTA CAGAATATTG TTAGCCACAA TGTGGGTGCT GGGAATCGAA
  CCCGGGTCCC CTTCAAAAGC AGCAAGTACT CTTAACCACT GAGCTATCTC TCCAGTGCTC
  CACTTCCTGA AGTCTTCCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147564419	ENSMUSSNP3677775	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49640047					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136008111 () rs orientation: forward

Symbol	Name	Function Class
Rr602339	regulatory region 602339	1767 bp proximal