rs49637349 SNP Detail

Summary

• ID
  rs49637349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127646146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGGAGCA GGAGTTCTAA
  CTGTCAAGCC CGGATGACGG GGATAATGTG CAATAAGCAG AAACAGTGGC TTTCGACAGG
  CAGGCAGATG GCCAGGATGA GACATGTGTC ATGAGTTCAT TTCAAATGGC TTTGGTTTGA
  GGTGCTTCGG GATGTTCACT GCAGGATGAA CTGGAAATGT GGCTGGAGTT GAGGATGTAC
  R
  GCCAAGTGGG AGGCGAGGCG CAGACTCAAG CAGGCTTGCC AGCTCTGCTC CCTGGCTGTC
  TAGCTCACCA CACACTCTGC ATAGCTCAAA AACTATAAGG TTTATTTTGG GGGGAAAAAA
  GGAGGATGAG AAGAAGAAGA AATAAATATA CTAATATCTA TCAAGATTCA GTGAACTATA
  ACAGATTTAA ATTTCAGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135873113	ENSMUSSNP2238556	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320957504	CHEV_3_127555415	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49637349					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127646146 () rs orientation: forward

Symbol	Name	Function Class
Rr584883	regulatory region 584883	487 bp distal
Rr584884	regulatory region 584884	270 bp proximal
Rr584885	regulatory region 584885	907 bp proximal
Rr584886	regulatory region 584886	1015 bp proximal