rs49618103 SNP Detail

Summary

• ID
  rs49618103
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144925898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTGAGAG CCAGTCTTTG
  ATGACTACTC TTAGCAAGGC TCTCTTATGG TTGTACACTT TCCTAAGACA GCACCACCTG
  GTGGGGACCA AATGTTATAA CATATGAGCC TGTGGTGGAC ACTTCACATT CAGCCCAGAG
  CAATCTCCAG GTTTATCTTT CTTAAATGGA CCAAGAGAAG ATTGGGGTTC ACTAGAGAGA
  K
  AAAGTATTTG TGGATTTATA AGGAATAAAT AAAACAGTAT TAGAGGACTG ATTGCTTTTT
  AAAGAATAGG CATGTTCTTA AATCAAATAG CTCAGCTGAT GGTTGAAATA ACTACAATGT
  TCTCAATATA TTCATGTTGA AATTGCTAAC GTTATGAATT CCAACCCTCT GAAAGCTTTC
  GAAGAAAAAA ACCAGAATGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136035849	ENSMUSSNP1600247	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49618103					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144925898 () rs orientation: forward

Symbol	Name	Function Class
Rr586766	regulatory region 586766	112 bp distal