rs49554837 SNP Detail

Summary

• ID
  rs49554837
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:116725547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCG CAGCATTGGG AAGGTGGAGA
  A
  CGAACGCTAG ATGCTGATAC AACCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147277274	ENSMUSSNP2667917	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs49554837					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:116725547 () rs orientation: forward

Symbol	Name	Function Class
Gm46758	predicted gene, 46758	within coordinates
Rr563025	regulatory region 563025	538 bp distal
Rr563026	regulatory region 563026	987 bp distal
Rr563027	regulatory region 563027	1738 bp proximal
Rr563028	regulatory region 563028	1977 bp proximal