rs49506092 SNP Detail

Summary

• ID
  rs49506092
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108072324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGTTTCAC AGCTAAGAAG GTAAGAACAG AAACTTCGGG
  CTTATAATCC CAGGACTGAT TTTGATCCAA CAAACTAAGT CCTCTGAGAG AACACTCAGG
  M
  GAATGGATTT TGAACAGTCT CTTTAAAAAG CGCTTCTAGT ACAACAAGTT GGGCCTGGTC
  CGGTGACCAA TCCTGCAGAT CCTAAGATGG AATCAAGGG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133494859	ENSMUSSNP3305984	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49506092					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108072324 () rs orientation: forward

Symbol	Name	Function Class
Rr636032	regulatory region 636032	1555 bp distal
Rr636033	regulatory region 636033	125 bp proximal