rs49475685 SNP Detail

Summary

• ID
  rs49475685
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70010983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATCCCGA AGTTTGCTTA
  ATCAGTTTTC TTTCCATCCT CAGGCCAGTA CCTGTCAGAA GGGAACTGCA AGCCTTGCAG
  AGAGGGTATT GACTACACCA GCCATTCCAA CCATTCTCTG GATTCATGTA TTCTCTGCAC
  AGTCTGTAAG GAAGGTACAG AGCAAAGGGG CCCTTCCCAC AGGAGGAGCA TGGGCAGGGG
  G
  ATTCATAACT GCAGTGAACT GGAAAACTTC AGTTCCAGCC ATCTTGATCT TCATTTTTCC
  CTGTTCTCCG CCTGTCTTTA GTTCAATGGG ACAAAACCAC AAGTTGTGCT GTGTTTTAGG
  AATCATTGAT ACCATCTGTT AAGAATGGGG TAGTGTGCCC TGTGGAGCCC CCCCCCCCGT
  GCCCTCAGAT GTATTGTGGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss139676605	ENSMUSSNP1828908	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49475685					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70010983 () rs orientation: forward

Symbol	Name	Function Class
Rr494754	regulatory region 494754	495 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Intron
Tssr126377	transcription start site region 126377	1574 bp upstream
Tssr126378	transcription start site region 126378	1623 bp upstream