rs49474911 SNP Detail

Summary

• ID
  rs49474911
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151475090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTGTTTG CTTGGACAAA
  ATACATTCAG ACTCAGCACT CCCTTGTGTT TGTCAATTCT TGTCGACTCT TTGCCCATCT
  GTCTGAAACC CTGATTCCAC AAGGAATGAG TGAGGCTGAC TGGGCCCGGT CTGTGGCAGT
  AGAGCACTTT GAATGTTATA AAAATCATAA ATGTACTTAT TTTATCAATA CATGAACCCA
  C
  AGATGAGTTC TTTACTGAAC ATGCTGTTAG AAAGTAGTAT GTAGATGGCG GAAGCAGGCC
  ACTGGTAATG GACCTTGGAA GACTTTATCT TGTCCCCAGC TCTCCTCAGG CACCATGATA
  CAAGCAGTTC TGTTCCACAA TGCTCTCCTT GGCATGAGTT CAGCTGCCCC ACAAGCTCAC
  AGATTATTAT GGACCATGAT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss136097990	ENSMUSSNP5384442	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321026832	CHEV_3_151432417	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs49474911					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151475090 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1585 bp proximal
Rr587416	regulatory region 587416	1732 bp proximal
Rr587417	regulatory region 587417	1843 bp proximal