rs49473038 SNP Detail

Summary

• ID
  rs49473038
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153442709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACCCTCAC CATCCTCGAA
  GTCGTGTCTG GCTGACTCTC TAATCACGCT CCTGAGTGTG CTGGGTTATC TCTGGCAGCG
  CACACTCAGT ACATGCAAAT TACCGCTTGT CTAACAAATG GGTGCTTAGC AGTTCTACAA
  AGTGCTCTGA CAACCCAAGA ATTAGTAACA CAGTCAACCA ACTCGCACAT CAGACCAACA
  M
  GACATAAGTA AATTATACAC TGGCTAGATG GCTGGTTGTG CTGTGTGTGT CTCCTTATGT
  AGGTCGAGGT TCTCTGTGAG TGGGAAGGAA GCAGGGGCGT CCAGTGAAAT GCGTGACACG
  CCATCAGAAC GGATGAGCCC CGGGAAGGCC GTAAGCTAGA AAACACTGTT GTGTATTAAC
  ATGCAATTTT TGGGGGGGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136111974	ENSMUSSNP5805508	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49473038					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153442709 () rs orientation: forward

Symbol	Name	Function Class
Rr587745	regulatory region 587745	38 bp distal