rs49467147 SNP Detail

Summary

• ID
  rs49467147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148254486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGC GCTCGCCTTG AACCTCAGCA
  R
  CACCCGGGAG GCAGAGGCAG GCAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147994857	ENSMUSSNP6457416	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321417778	CHEV_4_147544138	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49467147					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148254486 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15298	CpG island 15298	74 bp distal
Gm68449	predicted gene, 68449	244 bp upstream
Rr604612	regulatory region 604612	1292 bp distal
Rr604613	regulatory region 604613	1756 bp distal
Rr604614	regulatory region 604614	1531 bp distal
Rr604615	regulatory region 604615	686 bp proximal
Rr604616	regulatory region 604616	932 bp proximal