rs49459826 SNP Detail

Summary

• ID
  rs49459826
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151475140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCAATTCT TGTCGACTCT
  TTGCCCATCT GTCTGAAACC CTGATTCCAC AAGGAATGAG TGAGGCTGAC TGGGCCCGGT
  CTGTGGCAGT AGAGCACTTT GAATGTTATA AAAATCATAA ATGTACTTAT TTTATCAATA
  CATGAACCCA TAGATGAGTT CTTTACTGAA CATGCTGTTA GAAAGTAGTA TGTAGATGGC
  A
  GAAGCAGGCC ACTGGTAATG GACCTTGGAA GACTTTATCT TGTCCCCAGC TCTCCTCAGG
  CACCATGATA CAAGCAGTTC TGTTCCACAA TGCTCTCCTT GGCATGAGTT CAGCTGCCCC
  ACAAGCTCAC AGATTATTAT GGACCATGAT CCAAAGTAAA TCTTTCTTCA AGTTCCTTTC
  CTAACCCATT TTGTCACAGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136097991	ENSMUSSNP6172200	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321026833	CHEV_3_151432467	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49459826					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151475140 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1535 bp proximal
Rr587416	regulatory region 587416	1682 bp proximal
Rr587417	regulatory region 587417	1793 bp proximal