rs49430103 SNP Detail

Summary

• ID
  rs49430103
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101079017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAGACGC AGACAAAATT
  ACACGGAGGG TGCCGTGTGA ATAACCAAGT ATATATCCTC CTCCGAAGAC ACCAAGTATA
  TGGGTTGCAG AAAGCATTTT TAAAGGACTC ATAAGGGGAA AGTTCTCAGA ATTAAGGAAA
  AAAAAAAAAG ATGGTAATGC AGGTCCAGGA GGATTTTATG ACTGCAGCTA GAAAACTCTG
  R
  AAAAGAACCT CCCTTATATT ATAATTAAAA TAATAAACAC ACAAATCAAA GAAAGTATAT
  TAAAAGGGGG AAAAGAGAAA CACAGGCTTG CGTATGAAGA CAGGTTGTCA GAGTGACAGC
  CAGTTCCTCA AACAAGACTC TAAAAGCCAG AAGGTCTTGG AATTATGTAT TTCAGTTTCT
  GAAGGGCAGC AGCTGTCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135544657	ENSMUSSNP4917670	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49430103					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101079017 () rs orientation: forward

Symbol	Name	Function Class
Rr581973	regulatory region 581973	1165 bp distal