rs49428434 SNP Detail

Summary

• ID
  rs49428434
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147510433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTGAGACA AAAGGCATGC TGGACAGTGT CAAAGATGGC
  AGTGGTGGTG AGACTCCGAT AGTGACAACG TTTAAGGATG TGGAATTCAA AGCTGAGGTT
  T
  AGTGAGGACT GTTAGATGGT CCAATTTGGA ATGTTAATAG TTTGTGTTAC TTTCCCCTCT
  AGGAATAAGC AATATCAGAA TGTGAATGTC CTAATGCTT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss147958946	ENSMUSSNP510633	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs49428434					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147510433 () rs orientation: forward

Symbol	Name	Function Class
Rr398813	regulatory region 398813	1885 bp upstream
Rr604485	regulatory region 604485	22 bp proximal
Rr604486	regulatory region 604486	136 bp proximal