rs49422838 SNP Detail

Summary

• ID
  rs49422838
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119541332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTCTCATG TCAGAGCTGG GAGGGGCTCG CTCACACTGT
  GAATAGTGGG GGGGGGGGCG AGGGCATAGA ATGGTGGGTA CAGTGCTTAG TGCACAAGCA
  T
  GAGGACTCTA GTTCCATCCC CAGCACCCAC AGAAAAGACT GGGTGTTGTA TGCACGGGAA
  ATCCCAATGC TGGAAAGGCT GAGGCAACTT AACCAACAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133590995	ENSMUSSNP1451199	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49422838					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119541332 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	1853 bp upstream
Rr637713	regulatory region 637713	1512 bp distal
Rr637714	regulatory region 637714	693 bp distal
Rr637715	regulatory region 637715	1149 bp proximal