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rs49391532 SNP Detail
Summary
  • ID
    rs49391532
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr4:150018428 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GATTAAACTC GGGTCCTTGT
    GCTTGCACGA CGAGCTCTTT AAGCACTGAG CCATGTCCCC AGGTTGAGTG GTTTGGTGTG
    TTCGCGTAAA TGAACTTTAT GTATTTATGG TGCTGAGGAC TGAGGCAGGG CTGCTGGTAA
    GAGGAGCAAG GACTCCTCCA CGGTTCCAAG CAGAGCGTTA AAGGCTGCTT TCTGGCTCAC
    R
    GTTTCTTCCA CCAGGCACAC CCTGTTTCCT GATCAGACTT TGCCCCCATA GAGCCTTTGA
    CATCGGGCAG TCTTGTGCCC TCACATGTCT TTTGCATGCC TTCTATCCTT GACCTGTTTG
    TGCTCAGCCA CGGAACCCCT GTCCCTATGA TGCCTGACTC AGTCCAGCAG GGGCTGTCCT
    AACTGCTGCT ACTAAACCTT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
ss148043469 ENSMUSSNP1974528 ENSEMBL ENSEMBL_Sanger f SNP A G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
rs49391532 SNP A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:150018428 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr605111 regulatory region 605111 within coordinates
Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 Intron
Noncoding-Transcript-Variant

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory