rs49391532 SNP Detail

Summary

• ID
  rs49391532
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150018428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTAAACTC GGGTCCTTGT
  GCTTGCACGA CGAGCTCTTT AAGCACTGAG CCATGTCCCC AGGTTGAGTG GTTTGGTGTG
  TTCGCGTAAA TGAACTTTAT GTATTTATGG TGCTGAGGAC TGAGGCAGGG CTGCTGGTAA
  GAGGAGCAAG GACTCCTCCA CGGTTCCAAG CAGAGCGTTA AAGGCTGCTT TCTGGCTCAC
  R
  GTTTCTTCCA CCAGGCACAC CCTGTTTCCT GATCAGACTT TGCCCCCATA GAGCCTTTGA
  CATCGGGCAG TCTTGTGCCC TCACATGTCT TTTGCATGCC TTCTATCCTT GACCTGTTTG
  TGCTCAGCCA CGGAACCCCT GTCCCTATGA TGCCTGACTC AGTCCAGCAG GGGCTGTCCT
  AACTGCTGCT ACTAAACCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148043469	ENSMUSSNP1974528	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49391532					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150018428 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr605111	regulatory region 605111			within coordinates
Spsb1	splA/ryanodine receptor domain and SOCS box containing 1			Intron
				Noncoding-Transcript-Variant