rs49381249 SNP Detail

Summary

• ID
  rs49381249
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144287273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGAACAA AGGAGCATGT
  ACATAAGACC AAGAGTGATG AGCTCACCGT GTCTACTGTG CATAATGACA AAGTTTGTGT
  TGCAGTATAG CAAGGGCAGA ACAGGACAAA AGTGACTGTA TGGTGGAGAA TATCAAAGAG
  TCAAAGAAGA GGCTAGGCTG CCTGTATTGA GATGTGCTTT AAGACCCCTG TTGTTGAGAA
  R
  GAGGAGAAGC CTGCAAATTA GGAAACTGAG AAGAGGGTTG CCATCATGAT TCAAAGCTGA
  AGGGGTTGGG TAGTTACAGA TTGATTACAT TATGGTGGTC CAGAAGAACT GGGGGATATG
  TGTGAGTTTC AGATCTTGGA TGAGCCAGTG GCTTTGAGAA TGAATGGACA GAAAGGAAAA
  TACCAAGTAC TTGGCCATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147827777	ENSMUSSNP1254562	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49381249					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144287273 () rs orientation: forward

Symbol	Name	Function Class
Aadacl4fm2	AADACL4 family member 2	Intron
Rr604231	regulatory region 604231	685 bp distal